By default, pegasus-monitord is geared to expect backups of .out and .err files only for kickstart enabled jobs.
However, for 4.2 the planner has started associated the pegasus-exitcode postscript for auxillary jobs that don;t get launched via kickstart
For example, in case of worker package staging the create dir/stagein and untar jobs are not launched via kickstart.
Because of this change, the data from the .out and .err files of these auxillary jobs was not loaded into the stampede database
In monitord.log one sees.
vahi@obelix:/data/scratch/vahi/work/creamce/test/creamce-sharedfs/work/vahi/pegasus/blackdiamond/run0007$ more monitord.log.000
2013-01-24 13:23:59,373:job.py:read_stdout_stderr_files:410: WARNING: unable to read output file: /data/scratch/vahi/work/creamce/test/creamce-sharedfs/work/vahi/pegasus/blackdiamond/run0007/create_dir_blackdiamond_0_creamce.out, continuing...
2013-01-24 13:23:59,374:job.py:read_stdout_stderr_files:425: WARNING: unable to read error file: /data/scratch/vahi/work/creamce/test/creamce-sharedfs/work/vahi/pegasus/blackdiamond/run0007/create_dir_blackdiamond_0_creamce.err, continuing...
2013-01-24 13:24:15,423:job.py:read_stdout_stderr_files:410: WARNING: unable to read output file: /data/scratch/vahi/work/creamce/test/creamce-sharedfs/work/vahi/pegasus/blackdiamond/run0007/create_dir_blackdiamond_0_creamce.out, continuing...
2013-01-24 13:24:15,423:job.py:read_stdout_stderr_files:425: WARNING: unable to read error file: /data/scratch/vahi/work/creamce/test/creamce-sharedfs/work/vahi/pegasus/blackdiamond/run0007/create_dir_blackdiamond_0_creamce.err, continuing...
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