Details
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Bug
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Resolution: Fixed
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Minor
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master, 4.9.1
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None
Description
When clustering jobs by label, not all environmental variables are exported to the container.
In my tests I had one variable for the container and one variable for each of the two tasks in the labeled cluster.
What I observed was that the variable from the container and from the one of the two tasks was picked up, but the the environmental variable for the second task was ignored.
I was applying the env variables via profiles in the transformation catalog.
An example of a submit directory with this behavior can be found on workflow.isi.edu at:
/nfs/v5/georgpap/submit_folder.tar.gz
In my tests I had one variable for the container and one variable for each of the two tasks in the labeled cluster.
What I observed was that the variable from the container and from the one of the two tasks was picked up, but the the environmental variable for the second task was ignored.
I was applying the env variables via profiles in the transformation catalog.
An example of a submit directory with this behavior can be found on workflow.isi.edu at:
/nfs/v5/georgpap/submit_folder.tar.gz
