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  1. Pegasus
  2. PM-1082

transfer jobs don't have symlink destination URL even though symlink is enabled

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      One of my transfer jobs in a Titan workflow is failing.

      The error message is:

      error: globus_xio: Unable to open file /home/scec-02/cybershk/data/execdir/cybershk/pegasus/CyberShake_SGT_s431.dax/20160418T115135-0700/gridout_s431
      globus_xio: System error in open: No such file or directory
      globus_xio: A system call failed: No such file or directory

      The *.in file has:

      "src_urls": [
           { "site_label": "local", "url": "file:///home/scec-02/cybershk/data/execdir/cybershk/pegasus/CyberShake_SGT_s431.dax/20160418T115135-0700/gridout_s431", "priority": 100 },
           { "site_label": "titan", "url": "file:///lustre/atlas/proj-shared/geo112/execdir/cybershk/pegasus/CyberShake_SGT_s431.dax/20160418T115135-0700/gridout_s431", "priority": 50 }
         ],
         "dest_urls": [
           { "site_label": "titan", "url": "gsiftp://dtn.ccs.ornl.gov/lustre/atlas/proj-shared/geo112/execdir/cybershk/pegasus/CyberShake_SGT_s431.dax/20160418T115135-0700/AWP_SGT_s431/gridout_s431" }
         ] }

      However, in the *.sub file it looks like this job is being run on Titan:

      executable = /lustre/atlas/proj-shared/geo112/CyberShake/utils/pegasus/default-service/bin/pegasus-kickstart
      grid_resource = pbs /tmp/cybershk.titan.sock


      Also symlinking is turned on.

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            • Assignee:
              vahi Karan Vahi
              Reporter:
              scottcal Scott Callaghan
            • Watchers:
              3 Start watching this issue

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              • Created:
                Updated:
                Resolved: